All datasets dataset / cortex

Cortex

Scripts and source data for image processing, barcode calling, and cell type annotations in a seqFISH+ experiment.

reference Eng et al., 2019
homo sapiens Organism
19 MB Size
23-06-2026 Created
Source

The dataset includes processed image data, cell type annotations with Louvain clusters, gene IDs for transcript locations, and mRNA point locations, with additional data available on Zenodo.

used in
Spatial Simulators
references
  1. Eng, C.-H. L., Lawson, M., Zhu, Q., Dries, R., Koulena, N., Takei, Y., Yun, J., Cronin, C., Karp, C., Yuan, G.-C., & Cai, L. (2019). Transcriptome-scale super-resolved imaging in tissues by RNA seqFISH+. 10.1038/s41586-019-1049-y ↗